Illustrative Publications in Networks Biology from the Larger Community

Almaas E, Oltvai ZN, Barabasi AL. The Activity Reaction Core and Plasticity of Metabolic Networks. PLoS Comput Biol. 2005 Dec 16;1(7):e68 PMID: 16362071 (pdf)

Almaas E, Kovacs B, Vicsek T, Oltvai ZN, Barabasi AL. Global organization of metabolic fluxes in the bacterium Escherichia coli. Nature. 2004 Feb 26;427(6977):839-43. PMID: 14985762 (pdf)

Sachs K, Perez O, Pe'er D, Lauffenburger DA, Nolan GP. Causal protein-signaling networks derived from multiparameter single-cell data. Science. 2005 Apr 22;308(5721):523-9. (pdf)

Avi Ma'ayan, Robert D. Blitzer, Ravi Iyengar. TOWARD PREDICTIVE MODELS OF MAMMALIAN CELLS. Annual Review of Biophysics and Biomolecular Structure, Vol. 34: 319-349 (pdf)

Stelling J, Gilles ED, Doyle FJ Robustness properties of circadian clock architectures. Proc Natl Acad Sci U S A. 2004 Sep 7;101(36):13210-5. PMID: 15340155 (pdf)

von Dassow G, Meir E, Munro EM, Odell GM. The segment polarity network is a robust developmental module. Nature. 2000 Jul 13;406(6792):188-92. PMID: 10910359 (pdf)

Alon U, Surette MG, Barkai N, Leibler S. Robustness in bacterial chemotaxis. Nature. 1999 Jan 14;397(6715):168-71. (pdf)

Gheorghe Craciun, Martin Feinberg. MULTIPLE EQUILIBRIA IN COMPLEX CHEMICAL REACTION NETWORKS: I. THE INJECTIVITY PROPERTY. APPL. MATH. 2005 Vol. 65, No. 5, pp. 1526 (pdf)

Shmulevich I, Kauffman SA, Aldana M. Eukaryotic cells are dynamically ordered or critical but not chaotic. Proc Natl Acad Sci U S A. 2005 Sep 20;102(38):13439-44. PMID: 16155121 (pdf)

Janes KA, Albeck JG, Gaudet S, Sorger PK, Lauffenburger DA, Yaffe MB. A systems model of signaling identifies a molecular basis set for cytokine-induced apoptosis. Science. 2005 Dec 9;310(5754):1646-53. PMID: 16339439 (pdf)

Prill RJ, Iglesias PA, Levchenko A. Dynamic Properties of Network Motifs Contribute to Biological Network Organization. PLoS Biol. 2005 Oct 4;3(11):e343 PMID: 16187794 (pdf)